samplename filename condition paired stranded WT_BR1 /media/raid/data/michalis/rnaseq/bam/WT_P90_BR1.bam WT single no WT_BR2 /media/raid/data/michalis/rnaseq/bam/WT_P90_BR2.bam WT single no WT_BR3 /media/raid/data/michalis/rnaseq/bam/WT_P90_BR3.bam WT single no DEN_WT_BR1 /media/raid/data/michalis/rnaseq/bam/DEN_WT_BR1.bam DEN_WT single forward DEN_WT_BR2 /media/raid/data/michalis/rnaseq/bam/DEN_WT_BR2.bam DEN_WT single forward DEN_WT_BR3 /media/raid/data/michalis/rnaseq/bam/DEN_WT_BR3.bam DEN_WT single forward Smyd3KO_BR2 /media/raid/data/michalis/rnaseq/bam/Smyd3KO_P90_BR2.bam Smyd3KO single forward Smyd3KO_BR3 /media/raid/data/michalis/rnaseq/bam/Smyd3KO_P90_BR3.bam Smyd3KO single forward Smyd3KO_POOL /media/raid/data/michalis/rnaseq/bam/Smyd3KO_P90_POOL.bam Smyd3KO single forward DEN_Smyd3KO_BR1 /media/raid/data/michalis/rnaseq/bam/DEN_Smyd3KO_BR1.bam DEN_Smyd3KO single forward DEN_Smyd3KO_BR2 /media/raid/data/michalis/rnaseq/bam/DEN_Smyd3KO_BR2.bam DEN_Smyd3KO single forward DEN_Smyd3KO_BR3 /media/raid/data/michalis/rnaseq/bam/DEN_Smyd3KO_BR3.bam DEN_Smyd3KO single forward